Publications by Julian Flowers
mappy_dappy
mappy_dappy Quarto Quarto enables you to weave together content and executable code into a finished document. To learn more about Quarto see https://quarto.org. Andriuzzi and Wall (2017) Running Code When you click the Render button a document will be generated that includes both content and the output of embedded code. You can embed code like th...
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Critical appraisal
Table of contents Introduction Article critique Author 2050507 Published March 1, 2023 Introduction...
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Image table
Table of contents Load libraries and import data Data wrangling Recoding variables to create groups Table decoration with images Basic template for plotting categorical variables Select categorical variables Ordered bar charts (recommended) Labelling or modifying axes labels, adding titles Further modifications Putting it all together Making i...
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Getting coordinates from pdfs
Lat longs Julian Flowers Setup We’ll load the libraries we need and load the PDFs into R library(readtext); library(tidyverse); library(here) source(paste0(here("R", "decimal_coords.R"))) path <- here("my_corpus") path <- here::here("my_corpus") ## point R at the pdf directory f <- list.files(path, "pdf$", full.names = T) ## read fi...
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e360
Table of contents Blogs Yale Environment 360 Thinking like a human Project Drawdown 2022 MOD005002 TRI1 F01CAM Blogs Author Julian Flowers Blogs Yale Environment 360 Thinking like a human Project Drawdown Database of climate change solutions Warning: Some values were outside the color scale and will be treated as NA solution sector_s ...
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taxa
Table of contents Step by step guide Install Python package Install bioBert language model Initialise named entity recognition model Get text to process A single example Scaling up Using taxonerd in R Step by step guide This process is not for the faint-hearted but gives a rapid way of extracting taxa from texts which can enable processing of...
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srUtils
Table of contents Motivation Functions Getting started Usage Get elevation Scaling up Using the srUtils package Author Julian Flowers Published September 28, 2022 Motivation This note introduces the srUtils package which is a very early iteration of a set of functions designed to assist undertaking systematic mapping exercises in ecology...
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