Publications by Minsik Kim
IBS7048_2024_week14
Roading ggplot Advanced ggplot2 + theme() theme() and element_markdown() + guides() theme_… geom_smooth Colors facetting facet_wrap labs ggarrange Saving plot file kableExtra package kbl kable_styling Saving kbl file End of lecture Bibliography COD_20241204_MGK_IBS7048_week14_data_visualization_advanced Minsik Kim ...
1738 sym R (35793 sym/77 pcs) 46 img 4 tbl
BTE3207 2024 Week 13-2
Agenda Before begin.. RSM Analysis of RSM Bibliography COD_week13_2_MGK_BTE3207 Minsik Kim 2024-11-24 Agenda This lecture will practice running Plackett-Burman Design (PBD) and Response surface method (RSM) Before begin.. Let’s install packages. install.packages("daewr") ## ## The downloaded binary packages are in ## /va...
1349 sym R (12283 sym/28 pcs) 5 img
BTE3207_2024_Week13_1
Agenda Before begin.. the SBP dataset Before analyzing.. Simple linear regression Step 1 Step 2 Double-checking the distribution of data Using GGrally package Adding normal curve to histogram Deciding data is normal Q-Q plot of normal data Q-Q plot of SBP ...
6015 sym R (875542 sym/117 pcs) 37 img
IBS7048_2024_week12
Roading the data Basics of statistical tests MPG dataset Linear model Univariate linear model ANOVA How can we test different multiple associations? Anova - Multivariate linear model - Multivariate Statistical tests for alpha diversity Alpha diversity ...
3797 sym R (42594 sym/94 pcs) 11 img
BTE3207_2024_Week12_1
Random effect dataset data visualization Summary data Random intercept - two groups With effect modification… Simple LM + interaction term Random effect The sample analysis can be done for a categorical variable Data filtering With effect ...
3692 sym R (27787 sym/75 pcs) 34 img
BTE3207_2024_Week10_1
Before begin.. DBP ~ SBP Data with trendline Calculation of residual Distance from the mean value can be drawn as below. Two draw both, Example 2 - BMI vs. SBP Example 3 - Binary variables Pearson’s correlation Bibliography COD_week10_1_MGK_BTE3207 Minsik Kim 2024-11-04...
2039 sym Python (15317 sym/36 pcs) 10 img
BTE3207_2024_Week9_2
Statistics on the midterm results Score data in baxplot - by each problem set Boxplot of each problemset Score data in histogram - by each problem set Score total - summary statistics Score total - boxplot and histogram For fun, a statistical test Total score - boxp...
1720 sym Python (13037 sym/30 pcs) 10 img
IBS7048_2024_week8
Loading packages DADA2 Installing DADA2 Load DADA2 to your environment Opening multiple files for dada2 in R Chooing files with pattern Manipulating characters Plotting Filter and trim Error prediction Mering paired reads Sequence table Remove chimeras Track reads through the pipeline As...
8759 sym R (166916 sym/160 pcs) 9 img
BTE3207_2024_Week7_1
Before begin.. Creating a New Variable: Hypertension Understanding Normal Distribution Functions Plotting the Normal Distribution Logical Variables and Statistical Tests Single-sample t-test (getting confidence interval of some data) Two-Sample t-test: Z-Test for Proportions ...
4103 sym R (10978 sym/79 pcs) 4 img
BTE3207_2024_Week3_2
Introduction Setup Before begin.. Get current pathway of R working environment Listing files in current pathway Changing directory Going back to original folder Logical values…having logical values. Howe to select values How to install more functions in R Basic ...
6249 sym R (11122 sym/79 pcs) 2 img