Publications by Minsik Kim
IBS7048_2024_week5
Working with data in R Data element Vecetor Data frame Selecting variables (vectors) in data frame Data frame example Before begin.. Get current pathway of R working environment Listing files in current pathway Changing directory Going back to original folder Logical ...
12978 sym R (588078 sym/132 pcs) 15 img
BTE3207_2024_Week4_1
Before begin.. Sampling distribution and variability Sample variance Sampling distribution Sample mean Sample mean and sample distribution of skewed data Sample variance Sampling distribution Binary variables Sample mean of binary variable Sampling di...
4294 sym Python (77689 sym/98 pcs) 27 img
BTE3207_2024_Week4_2
Before begin.. Let’s load the SBP dataset. dataset_sbp <- read.csv(file = "Inha/5_Lectures/2024/Advanced biostatistics/scripts/BTE3207_Advanced_Biostatistics/dataset/sbp_dataset_korea_2013-2014.csv") head(dataset_sbp) ## SEX BTH_G SBP DBP FBS DIS BMI ## 1 1 1 116 78 94 4 16.6 ## 2 1 1 100 60 79 4 22.3 ## 3 1 1 100 6...
1349 sym Python (4730 sym/38 pcs) 7 img
BTE3207_2024_Week5_1
Before begin.. Let’s load the SBP dataset. dataset_sbp <- read.csv(file = "Inha/5_Lectures/2024/Advanced biostatistics/scripts/BTE3207_Advanced_Biostatistics/dataset/sbp_dataset_korea_2013-2014.csv") head(dataset_sbp) ## SEX BTH_G SBP DBP FBS DIS BMI ## 1 1 1 116 78 94 4 16.6 ## 2 1 1 100 60 79 4 22.3 ## 3 1 1 100 6...
662 sym R (12586 sym/26 pcs) 15 img
BTE3207_2024_Week3_1
Basic visualization of data Summary statistics of data summary() hist() hist() - breaks hist() - continued hist() - percentage Boxplot boxplot() - simple boxplot() - with x axis boxplot() - x-axis label Question Common distributions Symmetric & bell-shaped Right (positivel...
2877 sym Python (3954 sym/21 pcs) 17 img
IBS7048_week14
Roading the data Advanced ggplot2 + theme() theme() and element_markdown() + guides() theme_… geom_smooth Colors facetting facet_wrap labs ggarrange Saving plot file kableExtra package kbl kable_styling Saving kbl file Bibliography COD_20231129_MGK_IBS7048_week14_data_visualization_advanced Minsik Kim 2023-11-29 Roading the ...
1646 sym R (28766 sym/63 pcs) 45 img 3 tbl
BTE3207_Week13_2
Agenda Before begin.. RSM Analysis of RSM Bibliography COD_week13_2_MGK_BTE3207 Minsik Kim 2023-11-24 Agenda This lecture will practice running Plackett-Burman Design (PBD) and Response surface method (RSM) Before begin.. Let’s install packages. install.packages("daewr") ## ## The downloaded binary packages are in ## /va...
1295 sym R (10603 sym/23 pcs) 4 img
IBS7048_week13
Distrances of data Generating phylogenetic tree from sequence file Constructing phylogenetic tree object Merging the tree object into phyloseq tree Alternative! Here we can see that this is a set of 63 phylogenetic trees. If we want to look at a specific gene tree, we can use...
3637 sym R (422526 sym/48 pcs) 12 img
BTE3207_Week13_1
Agenda Before begin.. the SBP dataset Before analyzing.. Simple linear regression Step 1 Step 2 Double-checking the distribution of data Using GGrally package Adding normal curve to histogram Deciding data is normal Q-Q plot of normal data Q-Q plot of SBP ...
5983 sym R (14648 sym/88 pcs) 33 img
BTE3207_Week12_2
Analysis of variance Before begin.. DIS groups T-test? Linear model? Analysis of variance with smaller variance within group Extremely smalle variance Midterm dataset SBP dataset ANOVA in R Bibliography COD_week12_2_MGK_BTE3207 Minsik Kim 2023-11-15 Analys...
1857 sym Python (20095 sym/35 pcs) 10 img