Publications by rOpenSci - open tools for open science
handlr: convert among citation formats
Citations are a crucial piece of scholarly work. They hold metadata on each scholarly work, including what people were involved, what year the work was published, where it was published, and more. The links between citations facilitate insight into many questions about scholarly work. Citations come in many different formats including BibTex, RIS...
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Community Call – Research Applications of rOpenSci Taxonomy and Biodiversity Tools
Our next Community Call, on March 27th, aims to help people learn about using rOpenSci’s R packages to access and analyze taxonomy and biodiversity data, and to recognize the breadth and depth of their applications. We also aim to learn from the discussion how we might improve these tools. Presentations will start with an introduction to the to...
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drake transformed
Version 7.0.0 of drake just arrived on CRAN, and it is faster and easier to use than previous releases. install.packages("drake") Recap Data analysis can be slow. A round of scientific computation can take several minutes, hours, or even days to complete. After it finishes, if you update your code or data, your hard-earned results may no longer ...
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Getting your toes wet in R: Hydrology, meteorology, and more
Importance of Hydrology Given that liquid water is essential to life on Earth, water research cuts across numerous disciplines including hydrology, meteorology, geography, climate science, engineering, ecology, and more. Numerous R packages have emerged from this diversity of approaches, and we recently gathered many of them into a new rOpenSci t...
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Community Call – Security for R
“Security” can be a daunting, scary, and (frankly) quite often a very boring topic. BUT!, we promise that this Community Call on May 7th will be informative, engaging, and enlightening (or, at least not boring)! Applying security best practices is essential not only for developers or sensitive data storage but also for the everyday R user ins...
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When Standards Go Wild – Software Review for a Manuscript
Stefanie Butland, rOpenSci Community Manager Some things are just irresistible to a community manager – PhD student Hugo Gruson’s recent tweets definitely fall into that category. I was surprised and intrigued to see an example of our software peer review guidelines being used in a manuscript review, independent of our formal collaboration ...
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conditionz: control how many times conditions are thrown
conditionz is a new (just on CRAN today) R package for controlling how many times conditions are thrown. This package arises from an annoyance in another set of packages I maintain: The brranching package uses the taxize package internally, calling it’s function taxize::tax_name(). The taxize::tax_name() function throws useful messages to the u...
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Join, split, and compress PDF files with pdftools
Last month we released a new version of pdftools and a new companion package qpdf for working with pdf files in R. This release introduces the ability to perform pdf transformations, such as splitting and combining pages from multiple files. Moreover, the pdf_data() function which was introduced in pdftools 2.0 is now available on all major syste...
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Relaunching the qualtRics package
rOpenSci is one of the first organizations in the R community I ever interacted with, when I participated in the 2016 rOpenSci unconf. I have since reviewed several rOpenSci packages and been so happy to be connected to this community, but I have never submitted or maintained a package myself. All that changed when I heard the call for a new main...
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Open Trade Statistics
Introduction Open Trade Statistics (OTS) was created with the intention to lower the barrier to working with international economic trade data. It includes a public API, a dashboard, and an R package for data retrieval. The project started when I was affected by the fact that many Latin American Universities have limited or no access to the Unite...
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