Publications by Kennedi Todd
Aducanumab Study: IgG.M.823A
Setup Set working directory knitr::opts_knit$set(root.dir = "/research/labs/neurology/fryer/m214960/aducanumab/scripts/R") Load libraries # load libraries library(cowplot) # plot_grid() library(dplyr) # left_join() library(ggplot2) # ggplot() library(gridExtra) # grid.arrange() library(harmony) # RunHarmony() library(parallel) ...
1698 sym R (28438 sym/76 pcs) 40 img
Aducanumab Study: IgG.F.939A
Setup Set working directory knitr::opts_knit$set(root.dir = "/research/labs/neurology/fryer/m214960/aducanumab/scripts/R") Load libraries # load libraries library(cowplot) # plot_grid() library(dplyr) # left_join() library(ggplot2) # ggplot() library(gridExtra) # grid.arrange() library(harmony) # RunHarmony() library(parallel) ...
1698 sym R (28611 sym/76 pcs) 40 img
Aducanumab Study: IgG.F.939B
Setup Set working directory knitr::opts_knit$set(root.dir = "/research/labs/neurology/fryer/m214960/aducanumab/scripts/R") Load libraries # load libraries library(cowplot) # plot_grid() library(dplyr) # left_join() library(ggplot2) # ggplot() library(gridExtra) # grid.arrange() library(harmony) # RunHarmony() library(parallel) ...
1678 sym R (27077 sym/66 pcs) 30 img
Aducanumab Study: IgG.F.959B
Setup Set working directory knitr::opts_knit$set(root.dir = "/research/labs/neurology/fryer/m214960/aducanumab/scripts/R") Load libraries # load libraries library(cowplot) # plot_grid() library(dplyr) # left_join() library(ggplot2) # ggplot() library(gridExtra) # grid.arrange() library(harmony) # RunHarmony() library(parallel) ...
1678 sym R (27052 sym/66 pcs) 30 img
Aducanumab Study: Adu.F.736B
Setup Set working directory knitr::opts_knit$set(root.dir = "/research/labs/neurology/fryer/m214960/aducanumab/scripts/R") Load libraries # load libraries library(cowplot) # plot_grid() library(dplyr) # left_join() library(ggplot2) # ggplot() library(gridExtra) # grid.arrange() library(harmony) # RunHarmony() library(parallel) ...
1678 sym R (27076 sym/66 pcs) 30 img
Aducanumab Study: Adu.F.738A
Setup Set working directory knitr::opts_knit$set(root.dir = "/research/labs/neurology/fryer/m214960/aducanumab/scripts/R") Load libraries # load libraries library(cowplot) # plot_grid() library(dplyr) # left_join() library(ggplot2) # ggplot() library(gridExtra) # grid.arrange() library(harmony) # RunHarmony() library(parallel) ...
1674 sym R (26784 sym/66 pcs) 26 img
Aducanumab Study: Adu.M.734A
Setup Set working directory knitr::opts_knit$set(root.dir = "/research/labs/neurology/fryer/m214960/aducanumab/scripts/R") Load libraries # load libraries library(cowplot) # plot_grid() library(dplyr) # left_join() library(ggplot2) # ggplot() library(gridExtra) # grid.arrange() library(harmony) # RunHarmony() library(parallel) ...
1724 sym R (29381 sym/82 pcs) 46 img
Aducanumab Study: Nine Samples
Setup Set working directory knitr::opts_knit$set(root.dir = "/research/labs/neurology/fryer/m214960/aducanumab/scripts/R") Load libraries # load libraries library(cowplot) # plot_grid() library(dplyr) # left_join() library(ggplot2) # ggplot() library(gridExtra) # grid.arrange() library(harmony) # RunHarmony() library(parallel) ...
8938 sym R (52459 sym/153 pcs) 80 img
Aducanumab Study: Ten Samples
Setup Set working directory knitr::opts_knit$set(root.dir = "/research/labs/neurology/fryer/m214960/aducanumab/scripts/R") Load libraries # load libraries library(cowplot) # plot_grid() library(dplyr) # left_join() library(ggplot2) # ggplot() library(gridExtra) # grid.arrange() library(harmony) # RunHarmony() library(parallel) ...
8849 sym R (52043 sym/152 pcs) 80 img
Da Mesquita scRNAseq Processing
Setup Set working directory knitr::opts_knit$set(root.dir = ".") Load libraries # load libraries library(cowplot) # plot_grid() library(dplyr) # left_join() library(ggplot2) # ggplot() library(gridExtra) # grid.arrange() library(harmony) # RunHarmony() library(parallel) # detectCores() library(Seurat) # Read10X_h5() library(stringr) # str_...
8146 sym R (56786 sym/127 pcs) 51 img