Publications by Kaining Zhou
Report trail
R Markdown This is an R Markdown document. Markdown is a simple formatting syntax for authoring HTML, PDF, and MS Word documents. For more details on using R Markdown see http://rmarkdown.rstudio.com. When you click the Knit button a document will be generated that includes both content as well as the output of any embedded R code chunks within...
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Fully automated workflow of minirhizotron-based in situ root phenotyping
Fully automated workflow of minirhizotron-based in situ root phenotyping: from image acquisition to analysis Kaining Zhou February 07, 2023 This is a demonstration showing how to achieve the seamless workflow of in situ root phenotyping with the help of automated minirhizotron (MR) system and analysis model (Figure 1). Figure 1. The workflow of...
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Document
Fully Automated Workflow of Minirhizotron-based in situ Root Phenotyping: from Image Acquisition to Analysis Kaining Zhou February 07, 2023 This is a demonstration showing how to achieve the seamless workflow of in situ root phenotyping with the help of automated Minirhizotron (MR) system and analysis model (Figure 1). Figure 1. The workflow of...
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Up-to-date report of root growth in the field
Real-time root growth report Kaining Zhou January 24, 2023 Root images were taken by the automated Minirhizotron system in the field. Root length was estimated by a model based on convolutional neural network. Results of this report are derived from those estimated root length. This report is the final part of the fully automated workflow for Mi...
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Root data report
Root data report Kaining Zhou December 06, 2022 1. Root length density estimated by model This is the graph of root length density in different soil depth changing with date. 2. Rooting depth 3. Stitched root images ...
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Report_real-time root growth monitored by Minirhizotron
Real-time root growth report Kaining Zhou January 05, 2023 Root images were taken by the automated Minirhizotron system in the field. Root length was estimated by a model based on convolutional neural network. Results of this report are derived from those estimated root length. This report is the final part of the fully automated workflow for Mi...
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R Markdown Learning Resources
R Markdown learning resources Kaining Zhou July 28, 2021 Helpful articles about R Markdown 1. Title: Convince me to start using R Markdown Discription: Discuss difference between R script and RMarkdown Source: https://community.rstudio.com/t/convince-me-to-start-using-r-markdown/1636 2. Title: Markdown Syntax Discription: The mo...
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R Markdown shortcut
R Markdown Shortcut Kaining Zhou September 15, 2021 1. Add one line between elements: * Item 1 * Item 2 * Item 3 <p> </p> * Item 4 * Item 5 * Item 6 Displayed Item 1 Item 2 Item 3 Item 4 Item 5 Item 6 2. Nested Lists 1. Item 1 1. A corollary to the above item. 2. Yet another point to consider. 2. Item 2 * A coroll...
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Automatedroot
Fully automated: from root imaging to image analysis Kaining Zhou November 13, 2021 1. Automated Minirhizotron for root imaging: A minirhizotron (MR) is an in situ root imaging system that captures root dynamics over time. Commercial MRs usually are expensive and need manual operation which is time-consuming. This results in limited observation ...
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Fully automated: from root imaging to image analysis
Fully automated: from root imaging to image analysis Kaining Zhou November 10, 2021 1. Automated Minirhizotron for root imaging: A minirhizotron (MR) is an in situ root imaging system that captures root dynamics over time. Commercial MRs usually are expensive and need manual operation which is time-consuming. This results in limited observation ...
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