Publications by Di Cook

Describe Display

13.07.2006

Making good quality reproductions of ggobi plotsTo create high quality reproductions of ggobi plot windows, take a look at the DescribeDisplay plugin and corresponding R package.The R package is available at http://www.ggobi.org/describe-display/ . The R package takes the R scripts describing the ggobi plots produced by the plugin and reproduces...

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New ggobi release

29.08.2006

GGobiThere is a new release of ggobi 2.1.3 available on the web site. It has few changes, but several bugs have been fixed. A more major release will happen later this year. Related To leave a comment for the author, please follow the link and comment on their blog: GGobi. R-bloggers.com offers daily e-mail updates about R news and tutorials...

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Hack-at-it

25.10.2006

Hack-at-it 2006 Aug 3-5 the GGobi developers got together in Seattle, WA for the second hack-at-it. The setting was a rented house, with high speed internet and a lovely garden in which to work and talk. The main topic of this year’s hack-at-it was the ggobi pipeline. Plans were laid to restructure the backbone of the software to make it more e...

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Hack-at-it 2007

28.01.2008

The GGobi Hack-at-it 2007 was held just before useR! 2007 in Ames Iowa.The main focus this year was on the data pipeline again, and on pipelines in other software.Several projects were discussed: the geometric shapes, high-dimensional games, local neighborhood brushing, metabolomics data preprocessing. The first business meeting of the GGobi Foun...

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New material on the GGobi book web page

30.01.2008

The GGobi book is now available from Springer and Amazon, after quite a delay. Getting the figures printed correctly was difficult. Solutions to the exercises in the back of each chapter are available for instructors by emailing Springer.The movies on the book web site are currently being updated to include sound. Related To leave ...

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Hack-at-it 2008

27.06.2008

The 2008 Hack-at-it was held June 22-23, just before Data Vis VI, in Bremen Germany.The main topics for the meeting were: Release of 2.1.7 Continued design of GGobi 3 Related To leave a comment for the author, please follow the link and comment on their blog: GGobi. R-bloggers.com offers daily e-mail updates about R news and tutorials about ...

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GGobi in Wikipedia

27.06.2008

GGobi now has an entry in Wikipedia. Feel free to edit it! Related To leave a comment for the author, please follow the link and comment on their blog: GGobi. R-bloggers.com offers daily e-mail updates about R news and tutorials about learning R and many other topics. Click here if you're looking to post or find an R/data-science job. Wa...

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Hack-at-it 2009

09.06.2009

The annual GGobi hack-at-it was held June 5-7 in Ames Iowa. The main directions of work areDevelopment of a new canvas for R supporting interactive and dynamic graphics. Michael is leading the effort on this. Higher level routines for supporting brushing and linking are progressing, and the design will follow the pipeline ideas expres...

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Hack-at-it 2010

04.06.2010

Members of the team met for the second time in 2010, to work on a new interactive graphics canvas for R. The current stage of the project can be found at R-forge: qtinterfaces contains the new canvas, and plumbr contains the new mutable data frame structures which will enable linking between plots.The goal is to have working examples by the end o...

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Detecting U12-type introns using IntEREst R/Biocondcutor package

07.06.2019

Ali Oghabian2019-04-25The topics covered in this post are:R and IntEREst versionFiles in the zipAnnotating u12 type introns of HG38ncRNAs with U12-type intronsU12 annotation comparisonReferenceFiles in the zipYou can download the zip file the includes all the scripts and R objects from here. The files in the zip/folder include:annoFil.rda R obje...

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